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B

bufferSize - Variable in class ucar.unidata.io.zarr.RandomAccessDirectory
 
build(RandomAccessFile, Group.Builder, CancelTask) - Method in class ucar.nc2.iosp.zarr.ZarrIosp
 
buildFinish(NetcdfFile) - Method in class ucar.nc2.iosp.zarr.ZarrIosp
 

C

canProvide(String) - Method in class thredds.inventory.zarr.MFileZip.Provider
 
canScan(String) - Method in class thredds.filesystem.zarr.ControllerZip.Provider
 
children - Variable in class ucar.unidata.io.zarr.RandomAccessDirectory
 
CHUNKS - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 
close() - Method in class thredds.filesystem.zarr.ControllerZip
 
close() - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
 
compareTo(MFile) - Method in class thredds.inventory.zarr.MFileZip
 
COMPRESSOR - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 
ControllerZip - Class in thredds.filesystem.zarr
Implements an MController for tracking ZipEntries within a ZipFile
ControllerZip() - Constructor for class thredds.filesystem.zarr.ControllerZip
 
ControllerZip.FilteredIterator - Class in thredds.filesystem.zarr
 
ControllerZip.MFileIterator - Class in thredds.filesystem.zarr
 
ControllerZip.MFileIteratorLeaves - Class in thredds.filesystem.zarr
 
ControllerZip.Provider - Class in thredds.filesystem.zarr
 
create() - Method in class thredds.filesystem.zarr.ControllerZip.Provider
 
create(String) - Method in class thredds.inventory.zarr.MFileZip.Provider
 

D

DEFAULT_SEPARATOR - Static variable in class ucar.nc2.iosp.zarr.ZArray
 
DIMENSION_SEPARATOR - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 
DTYPE - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 

E

ext - Static variable in class thredds.inventory.zarr.MFileZip.Provider
 

F

FILL_VALUE - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 
FILTERS - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 

G

getAuxInfo() - Method in class thredds.inventory.zarr.MFileZip
 
getByteOrder() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getChunks() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getCompressor() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getDataFileName(String) - Static method in class ucar.nc2.iosp.zarr.ZarrUtils
Get name of an file within a Zarr object, i.e.
getDataType() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getDtype() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getElemSize() - Method in class ucar.nc2.iosp.zarr.ZarrLayoutBB
 
getFileAtPos(int) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
Return the directory item containing the specified position
getFilesInPath(String) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
Find all files in the store that fall under the given path
getFileTypeDescription() - Method in class ucar.nc2.iosp.zarr.ZarrIosp
 
getFileTypeId() - Method in class ucar.nc2.iosp.zarr.ZarrIosp
 
getFillValue() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getFilters() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getInventoryAll(CollectionConfig, boolean) - Method in class thredds.filesystem.zarr.ControllerZip
 
getInventoryTop(CollectionConfig, boolean) - Method in class thredds.filesystem.zarr.ControllerZip
 
getLastModified() - Method in class thredds.inventory.zarr.MFileZip
 
getLastModified() - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
 
getLastModified() - Method in interface ucar.unidata.io.zarr.RandomAccessDirectoryItem
 
getLastModified() - Method in class ucar.unidata.io.zarr.VirtualRandomAccessFile
 
getLeafEntries() - Method in class thredds.inventory.zarr.MFileZip
 
getLength() - Method in class thredds.inventory.zarr.MFileZip
 
getLocation() - Method in interface ucar.unidata.io.zarr.RandomAccessDirectoryItem
 
getLocation() - Method in class ucar.unidata.io.zarr.VirtualRandomAccessFile
 
getName() - Method in class thredds.inventory.zarr.MFileZip
 
getObjectNameFromPath(String) - Static method in class ucar.nc2.iosp.zarr.ZarrUtils
Get the name of the current Zarr object (variable or group) Defined as the name of the current directory
getOrder() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getOrOpenRaf() - Method in interface ucar.unidata.io.zarr.RandomAccessDirectoryItem
 
getOrOpenRaf() - Method in class ucar.unidata.io.zarr.VirtualRandomAccessFile
 
getParent() - Method in class thredds.inventory.zarr.MFileZip
 
getParentGroupNameFromPath(String, String) - Static method in class ucar.nc2.iosp.zarr.ZarrUtils
Get the name of the parent Group of an object Defined as the name of the directory two level up
getPath() - Method in class thredds.inventory.zarr.MFileZip
 
getProtocol() - Method in class thredds.filesystem.zarr.ControllerZip.Provider
 
getProtocol() - Method in class thredds.inventory.zarr.MFileZip.Provider
 
getRaf() - Method in interface ucar.unidata.io.zarr.RandomAccessDirectoryItem
 
getRaf() - Method in class ucar.unidata.io.zarr.VirtualRandomAccessFile
 
getRelativePath() - Method in class thredds.inventory.zarr.MFileZip
 
getRootPath() - Method in class thredds.inventory.zarr.MFileZip
 
getSeparator() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getShape() - Method in class ucar.nc2.iosp.zarr.ZArray
 
getSubdirs(CollectionConfig, boolean) - Method in class thredds.filesystem.zarr.ControllerZip
 
getTotalNelems() - Method in class ucar.nc2.iosp.zarr.ZarrLayoutBB
 

H

hasNext() - Method in class thredds.filesystem.zarr.ControllerZip.MFileIterator
 
hasNext() - Method in class ucar.nc2.iosp.zarr.ZarrLayoutBB
 

I

isBuilder() - Method in class ucar.nc2.iosp.zarr.ZarrIosp
 
isDirectory() - Method in class thredds.inventory.zarr.MFileZip
 
isDirectory() - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
 
isOwnerOf(String) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory.Provider
 
isReadable() - Method in class thredds.inventory.zarr.MFileZip
 
isValidFile(RandomAccessFile) - Method in class ucar.nc2.iosp.zarr.ZarrIosp
 

L

length() - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
 
length() - Method in interface ucar.unidata.io.zarr.RandomAccessDirectoryItem
 
length() - Method in class ucar.unidata.io.zarr.VirtualRandomAccessFile
 

M

MFileIterator() - Constructor for class thredds.filesystem.zarr.ControllerZip.MFileIterator
 
MFileZip - Class in thredds.inventory.zarr
Implements thredds.inventory.MFile for ZipFiles and ZipEntries
MFileZip(ZipFile) - Constructor for class thredds.inventory.zarr.MFileZip
 
MFileZip(String) - Constructor for class thredds.inventory.zarr.MFileZip
 
MFileZip.Provider - Class in thredds.inventory.zarr
 

N

next() - Method in class thredds.filesystem.zarr.ControllerZip.MFileIterator
 
next() - Method in class ucar.nc2.iosp.zarr.ZarrLayoutBB
 

O

open(String) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory.Provider
Open a location that this Provider is the owner of.
open(String, int) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory.Provider
 
ORDER - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 

P

Provider() - Constructor for class thredds.filesystem.zarr.ControllerZip.Provider
 
Provider() - Constructor for class thredds.inventory.zarr.MFileZip.Provider
 
Provider() - Constructor for class ucar.unidata.io.zarr.RandomAccessDirectory.Provider
 

R

RandomAccessDirectory - Class in ucar.unidata.io.zarr
This class allows a directory structure to be read in memory as a single file.
RandomAccessDirectory(String) - Constructor for class ucar.unidata.io.zarr.RandomAccessDirectory
 
RandomAccessDirectory(String, int) - Constructor for class ucar.unidata.io.zarr.RandomAccessDirectory
 
RandomAccessDirectory.Provider - Class in ucar.unidata.io.zarr
Hook into service provider interface to RandomAccessFileProvider.
RandomAccessDirectoryItem - Interface in ucar.unidata.io.zarr
Interface for items held by a RandomAccessDirectory Provides a wrapper for a RandomAccessFile
read() - Method in class ucar.nc2.iosp.zarr.ZarrHeader
Create CDM object on 'rootGroup' from RandomAccessFile
read_(long, byte[], int, int) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
 
readData(Variable, Section) - Method in class ucar.nc2.iosp.zarr.ZarrIosp
 
readToByteChannel(WritableByteChannel, long, long) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
 
remove() - Method in class thredds.filesystem.zarr.ControllerZip.MFileIterator
 

S

setAuxInfo(Object) - Method in class thredds.inventory.zarr.MFileZip
 
setFileToPos(long) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
sets current RandomAccessFile to that containing pos saves start position on current RAF
SHAPE - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 
startIndex() - Method in interface ucar.unidata.io.zarr.RandomAccessDirectoryItem
 
startIndex() - Method in class ucar.unidata.io.zarr.VirtualRandomAccessFile
 
subscriptsToIndex(int[], int[]) - Static method in class ucar.nc2.iosp.zarr.ZarrUtils
Converts subscripted chunk number to a flat index

T

thredds.filesystem.zarr - package thredds.filesystem.zarr
 
thredds.inventory.zarr - package thredds.inventory.zarr
 
trimLocation(String) - Static method in class ucar.nc2.iosp.zarr.ZarrUtils
Remove characters outside logical filepath, e.g.

U

ucar.nc2.iosp.zarr - package ucar.nc2.iosp.zarr
 
ucar.unidata.io.zarr - package ucar.unidata.io.zarr
 

V

valueOf(String) - Static method in enum ucar.nc2.iosp.zarr.ZArray.Order
Returns the enum constant of this type with the specified name.
values() - Static method in enum ucar.nc2.iosp.zarr.ZArray.Order
Returns an array containing the constants of this enum type, in the order they are declared.
VirtualRandomAccessFile - Class in ucar.unidata.io.zarr
A wrapper for a RandomAccessFile that allows lazy loading
VirtualRandomAccessFile(String, long, long, long, int) - Constructor for class ucar.unidata.io.zarr.VirtualRandomAccessFile
 

W

write(int) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
Not implemented - use write methods on the leaf RandomAccessFile e.g.
writeBytes(byte[], int, int) - Method in class ucar.unidata.io.zarr.RandomAccessDirectory
Not implemented - use write methods on the leaf RandomAccessFile e.g.

Z

ZArray - Class in ucar.nc2.iosp.zarr
Java representation of .zarray metadata
ZArray(int[], int[], Object, String, Filter, String, List<Filter>, String) - Constructor for class ucar.nc2.iosp.zarr.ZArray
 
ZARRAY - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 
ZArray.Order - Enum in ucar.nc2.iosp.zarr
Column or row order
ZarrFormatException - Exception in ucar.nc2.iosp.zarr
 
ZarrFormatException() - Constructor for exception ucar.nc2.iosp.zarr.ZarrFormatException
 
ZarrFormatException(String, String) - Constructor for exception ucar.nc2.iosp.zarr.ZarrFormatException
 
ZarrFormatException(String) - Constructor for exception ucar.nc2.iosp.zarr.ZarrFormatException
 
ZarrHeader - Class in ucar.nc2.iosp.zarr
Class to read Zarr metadata from a RandomAccessDirectory and map it to a CDM Object
ZarrHeader(RandomAccessDirectory, Group.Builder) - Constructor for class ucar.nc2.iosp.zarr.ZarrHeader
 
ZarrIosp - Class in ucar.nc2.iosp.zarr
IOSP for reading/writing Zarr/NCZarr formats
ZarrIosp() - Constructor for class ucar.nc2.iosp.zarr.ZarrIosp
 
ZarrKeys - Class in ucar.nc2.iosp.zarr
Zarr object names as String constants
ZarrKeys() - Constructor for class ucar.nc2.iosp.zarr.ZarrKeys
 
ZarrLayoutBB - Class in ucar.nc2.iosp.zarr
A tiled layout for Zarr formats that accommodates uncompressing and filtering data before returning
ZarrLayoutBB(Variable, Section, RandomAccessFile) - Constructor for class ucar.nc2.iosp.zarr.ZarrLayoutBB
 
ZarrUtils - Class in ucar.nc2.iosp.zarr
 
ZarrUtils() - Constructor for class ucar.nc2.iosp.zarr.ZarrUtils
 
ZATTRS - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 
ZGROUP - Static variable in class ucar.nc2.iosp.zarr.ZarrKeys
 
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